|
|
Time |
Course |
Activity, Lokalbokningsaktivitet |
Premises, Location Comment |
Staff |
Title, Public comment, URL |
w4 |
Mon 2020-01-20 w4 |
|
|
10:00 - 11:15 |
BIOR25 |
Compulsory, Introduction |
Heden (G110) |
Helena Westerdahl, Staffan Bensch |
Introduction and presentation |
|
11:30 - 12:00 |
BIOR25 |
Compulsory, Excursion |
Heden (G110) |
|
Gather equipment and prepare for excursion |
|
13:00 - 14:00 |
BIOR25 |
Lecture |
Heden (G110) |
Staffan Bensch |
DNA diagnostics and BarCoding |
|
Tue 2020-01-21 |
|
|
08:30 - 15:00 |
BIOR25 |
Compulsory, Excursion |
|
Helena Westerdahl, Mikael Sörensson, Staffan Bensch |
Excursion |
|
15:00 - 16:00 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
David Gomez Blanco, Samantha Mellinger |
DNA extraction |
|
Wed 2020-01-22 |
|
|
08:00 - 12:30 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
David Gomez Blanco, Samantha Mellinger |
DNA extraction continued |
|
13:30 - 14:30 |
BIOR25 |
Lecture |
Heden (G110) |
Helena Westerdahl |
Basic PCR and Sequencing |
|
14:30 - 16:30 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
David Gomez Blanco, Samantha Mellinger |
DNA extaction continued / set up PCR |
|
Thu 2020-01-23 |
|
|
09:00 - 10:00 |
BIOR25 |
Compulsory, Seminar |
Ris - Hjortronet (T104), Ris - Kråkbäret (T107), Ris - Lingonet (T105), Ris - Ripbäret (T106) |
Aivars Cirulis, Hanna Sigeman |
Chapter 3 & 4 (Molecular Biology and tools for ecologists) |
|
10:30 - 13:00 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
David Gomez Blanco, Samantha Mellinger |
DNA extaction continued / set up PCR |
|
13:00 - 14:30 |
BIOR25 |
Information |
|
|
Information om utbytesstudier (på svenska). Tina Ledje. Lokal: Receptorn (D205) i biologihuset. |
|
Fri 2020-01-24 |
|
|
08:00 - 12:00 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
David Gomez Blanco, Samantha Mellinger |
PCR products on minigels, precipitate PCR |
|
13:00 - 14:15 |
BIOR25 |
Lecture |
Heden (G110) |
Staffan Bensch |
Sequence analyses & phylogenetic trees 1 |
|
14:30 - 16:30 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
David Gomez Blanco, Samantha Mellinger |
PCR for sequencing reaction |
w5 |
Mon 2020-01-27 w5 |
|
|
09:00 - 11:00 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
Staffan Bensch |
Internet-based sequence analyses |
|
11:15 - 12:00 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
David Gomez Blanco, Samantha Mellinger |
PCR continued, precipitate sequencing rxn |
|
13:00 - 16:30 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
David Gomez Blanco, Samantha Mellinger |
Continued, sequence rxn to ABI robot |
|
Tue 2020-01-28 |
|
|
09:00 - 11:15 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
Anne Duplouy, Staffan Bensch |
Alignment Exercise |
|
12:30 - 13:30 |
BIOR25 |
Lecture |
Heden (G110) |
Max Lundberg |
Sequence databases |
|
13:30 - 16:00 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
Helena Westerdahl, Max Lundberg |
BLAST & ORF |
|
Wed 2020-01-29 |
|
|
09:00 - 10:00 |
BIOR25 |
Lecture |
Heden (G110) |
Staffan Bensch |
Phylogenetic trees 2 |
|
10:30 - 12:00 |
BIOR25 |
Compulsory, Seminar |
Ris - Hjortronet (T104), Ris - Kråkbäret (T107), Ris - Lingonet (T105), Ris - Ripbäret (T106) |
Emily O'Connor, Hanna Sigeman |
Chapter 8 (Neutral and adaptive molecular variation) |
|
13:00 - 14:30 |
BIOR25 |
Lecture |
Heden (G110) |
Staffan Bensch |
Phylogenetic trees 3 |
|
Thu 2020-01-30 |
|
|
09:00 - 12:00 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110), Krypt - Masklaven (T105a), Krypt - Renlaven (T108), Ris - Ripbäret (T106) |
Staffan Bensch |
Editing & aligning obtained sequences |
|
13:00 - 15:00 |
BIOR25 |
Information |
|
|
Information about Master´s degree projects. Compulsary for Master´s programme students in Biology. Location: heden. Ecology building |
|
Fri 2020-01-31 |
|
|
08:30 - 12:00 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
Staffan Bensch |
Neighbor joining and other tree analyses of sequences |
|
13:00 - 16:00 |
BIOR25 |
Compulsory, Laboratory session |
Ris - Hjortronet (T104), Ris - Kråkbäret (T107), Ris - Lingonet (T105), Ris - Ripbäret (T106) |
Staffan Bensch |
Phylogenetic analyses of obtained sequences |
w6 |
Mon 2020-02-03 w6 |
|
|
09:00 - 10:00 |
BIOR25 |
Lecture |
Heden (G110) |
Helena Westerdahl |
Molecular methods |
|
10:30 - 12:00 |
BIOR25 |
Lecture |
Heden (G110) |
Niklas Wahlberg |
Molecular clocks and dating |
|
13:00 - 16:00 |
BIOR25 |
Self-study |
Ris - Hjortronet (T104), Ris - Kråkbäret (T107), Ris - Lingonet (T105), Ris - Ripbäret (T106) |
|
Prepare for presentation |
|
Tue 2020-02-04 |
|
|
09:00 - 12:00 |
BIOR25 |
Self-study |
Ris - Hjortronet (T104), Ris - Kråkbäret (T107), Ris - Lingonet (T105), Ris - Ripbäret (T106) |
|
Prepare for presentation |
|
13:00 - 16:00 |
BIOR25 |
Compulsory, Seminar |
Heden (G110) |
Helena Westerdahl, Mikael Sörensson, Staffan Bensch |
Presentation projects BarCoding |
|
Wed 2020-02-05 |
|
|
09:00 - 10:30 |
BIOR25 |
Lecture |
Heden (G110) |
Bengt Hansson |
Genes in populations I - diversity |
|
10:30 - 12:00 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
Bengt Hansson |
Population structure exercise I - allele data |
|
13:00 - 16:00 |
BIOR25 |
Compulsory, Laboratory session |
Heden (G110) |
Bengt Hansson |
Population structure exercise I - allele data |
|
Thu 2020-02-06 |
|
|
10:30 - 12:00 |
BIOR25 |
Compulsory, Seminar |
Ris - Hjortronet (T104), Ris - Kråkbäret (T107), Ris - Lingonet (T105), Ris - Ripbäret (T106) |
Emily O'Connor, Samantha Mellinger |
Chapter 7 (Population genetics) |
|
Fri 2020-02-07 |
|
|
09:00 - 10:00 |
BIOR25 |
Lecture |
Ängen (G111) |
Bengt Hansson |
Genes in populations II - structure |
|
10:00 - 11:00 |
BIOR25 |
Compulsory, Seminar |
Ängen (G111) |
Bengt Hansson |
Population structure exercise II - allele data |
|
11:00 - 12:00 |
BIOR25 |
Compulsory, Laboratory session |
Ängen (G111) |
Bengt Hansson |
Population structure exercise III - mtDNA data |
|
13:00 - 15:00 |
BIOR25 |
Compulsory, Laboratory session |
Ängen (G111) |
Staffan Bensch |
Primer design |
|